loadMeta: Load a count dataset associated with a study.

Description Usage Arguments Value See Also Examples

View source: R/loadMeta.R

Description

Load a matrix of OTUs in a tab delimited format

Usage

1
loadMeta(file, sep = "\t")

Arguments

file

Path and filename of the actual data file.

sep

File delimiter.

Value

A list with objects 'counts' and 'taxa'.

See Also

loadPhenoData

Examples

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2
dataDirectory <- system.file("extdata", package="metagenomeSeq")
lung = loadMeta(file.path(dataDirectory,"CHK_NAME.otus.count.csv"))

metagenomeSeq documentation built on May 31, 2017, 11:53 a.m.

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