minSpanningTree-set: Set the minimum spanning tree generated by Monocle during...

In monocle: Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq

Description

Sets the minimum spanning tree used by Monocle during cell ordering. Not intended to be called directly.

Usage

minSpanningTree(cds) <- value

Arguments

cds	A CellDataSet object.
value	an igraph object describing the minimum spanning tree.

Value

An updated CellDataSet object

Examples

## Not run: 
cds <- minSpanningTree(T)

## End(Not run)

monocle documentation built on Nov. 8, 2020, 5:06 p.m.