synergyfinder: Calculate and Visualize Synergy Scores for Drug Combinations

Efficient implementations for analyzing pre-clinical multiple drug combination datasets. 1. Synergy scores valuculation via all the popular models, including HSA, Loewe, Bliss and ZIP; 2. Drug Sensitivity Score (CSS) and Relitave Inhibition (RI) for drug sensitivity evaluation; 3. Visualization for drug combination matrices and scores. Based on this package, we also provide a web application (http://synergyfinder.org/) for users who prefer more friendly user interface.

Getting started

Package details

AuthorShuyu Zheng [aut, cre], Jing Tang [aut]
Bioconductor views Software StatisticalMethod
MaintainerShuyu Zheng <shuyu.zheng@helsinki.fi>
LicenseMozilla Public License 2.0
Version2.4.13
URL http://synergyfinder.org/
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("synergyfinder")

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synergyfinder documentation built on April 4, 2021, 6 p.m.