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Allows for importing most common motif types into R for use by functions provided by other Bioconductor motif-related packages. Motifs can be exported into most major motif formats from various classes as defined by other Bioconductor packages. A suite of motif and sequence manipulation and analysis functions are included, including enrichment, comparison, P-value calculation, shuffling, trimming, higher-order motifs, and others.
Package details |
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Author | Benjamin Jean-Marie Tremblay [aut, cre] (<https://orcid.org/0000-0002-7441-2951>), Spencer Nystrom [ctb] |
Bioconductor views | DataImport GeneRegulation MotifAnnotation MotifDiscovery |
Maintainer | Benjamin Jean-Marie Tremblay <b2tremblay@uwaterloo.ca> |
License | GPL-3 |
Version | 1.8.5 |
URL | https://bioconductor.org/packages/universalmotif/ |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
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