Nothing
test_that("update_rates constant rates is silent and gives correct output", {
timeval <- 0
total_time <- 1
gam <- 0.009
mu <- 2.0
laa <- 1.0
lac <- 2.5
K <- 3
area_pars <- create_area_pars(max_area = 1,
current_area = 1,
proportional_peak_t = 0,
total_island_age = 0,
sea_level_amplitude = 0,
sea_level_frequency = 0,
island_gradient_angle = 0)
hyper_pars <- create_hyper_pars(d = 0, x = 0)
island_ontogeny <- translate_island_ontogeny("const")
sea_level <- translate_sea_level("const")
extcutoff <- 1000.0
num_spec <- 0
num_immigrants <- 0
mainland_n <- 1
set.seed(42)
testthat::expect_silent(rates <- update_rates(
timeval = timeval,
total_time = total_time,
gam = gam,
laa = laa,
lac = lac,
mu = mu,
hyper_pars = hyper_pars,
area_pars = area_pars,
island_ontogeny = island_ontogeny,
sea_level = sea_level,
extcutoff = extcutoff,
K = K,
num_spec = num_spec,
num_immigrants = num_immigrants,
mainland_n = mainland_n))
testthat::expect_true(are_rates(rates))
expected_rates <- list(immig_rate = 0.009,
ext_rate = 0,
ana_rate = 0,
clado_rate = 0)
testthat::expect_equal(rates, expected_rates)
})
test_that("update area-dependent rates is silent and gives correct output", {
set.seed(42)
lac <- 2.5
laa <- 1.0
gam <- 0.009
mu <- 2.5
K <- 3
area_pars <- create_area_pars(
max_area = 1.0,
current_area = 0.5,
proportional_peak_t = 0.5,
total_island_age = 1.2,
sea_level_amplitude = 0,
sea_level_frequency = 0,
island_gradient_angle = 0)
hyper_pars <- create_hyper_pars(d = 0.2, x = 0.1)
peak <- calc_peak(total_time = 1, area_pars = area_pars)
testthat::expect_silent(rates <- update_rates(
timeval = 0,
total_time = 1,
gam = gam,
laa = laa,
lac = lac,
mu = mu,
hyper_pars = hyper_pars,
area_pars = area_pars,
island_ontogeny = translate_island_ontogeny("beta"),
sea_level = translate_sea_level("const"),
extcutoff = 1000.0,
K = K,
num_spec = 0,
num_immigrants = 0,
mainland_n = 1,
peak = peak))
testthat::expect_true(are_rates(rates))
expected_rates <- list(immig_rate = 0,
ext_rate = 0,
ana_rate = 0,
clado_rate = 0)
testthat::expect_equal(rates, expected_rates)
})
#test_that("update area-dependent rates with sea-level is silent and gives
#correct output"
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.