MAPsig1: Pattern signifficance
In MAMA: Meta-Analysis of MicroArray
Description
Usage
Arguments
Value
Author(s)
References
Description
Function computes significance of observed number of strong and soft matches by
randomly choosing differentially expressed genes in each study.
Usage
1
MAPsig1(unique.pat, value.dis, iter = 1000)
Arguments
unique.pat
unique meta-analysis patterns
value.dis
binary matrix from T-statistics
iter
number of iteration
Value
data.frame with p-values for number of oberved soft and strong matches
Author(s)
Ivana Ihnatova
References
Yang, X., Bentink, S. and Spang, R. 2005, Detecting Common Gene Expression
Patterns in Multiple Cancer Outcome Entities, Biomedical Microdevices,
Vol.7:3, pp. 247-251
MAMA documentation built on Jan. 15, 2017, 3:05 p.m.
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Description Usage Arguments Value Author(s) References
Description
Function computes significance of observed number of strong and soft matches by randomly choosing differentially expressed genes in each study.
Usage
1 | MAPsig1(unique.pat, value.dis, iter = 1000)
|
Arguments
unique.pat |
unique meta-analysis patterns |
value.dis |
binary matrix from T-statistics |
iter |
number of iteration |
Value
data.frame with p-values for number of oberved soft and strong matches
Author(s)
Ivana Ihnatova
References
Yang, X., Bentink, S. and Spang, R. 2005, Detecting Common Gene Expression Patterns in Multiple Cancer Outcome Entities, Biomedical Microdevices, Vol.7:3, pp. 247-251
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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