preparePermutations: Function to prepare permutation and subsamples
In MAMA: Meta-Analysis of MicroArray
Description
Usage
Arguments
Value
Author(s)
Description
Function prepares permutations of class labels and subsamples from expression data
Usage
1
preparePermutations(id, B, sample.ratio = 0.8)
Arguments
id
Binary vector (0's and 1's) of class labels to be permuted and subsampled
B
number of premutations
sample.ratio
ratio for subsampling, default 0.8 means 80% of samples from each group is selected
Value
A list
yperm
Permutation - vectors of 0's and 1's shuffeled
ysubs
Subsamples - numeric vectors indicating which samples should be selected
Author(s)
Ivana Ihnatova, Claudio Lottaz
MAMA documentation built on Jan. 15, 2017, 3:05 p.m.
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Description Usage Arguments Value Author(s)
Description
Function prepares permutations of class labels and subsamples from expression data
Usage
1 | preparePermutations(id, B, sample.ratio = 0.8)
|
Arguments
id |
Binary vector (0's and 1's) of class labels to be permuted and subsampled |
B |
number of premutations |
sample.ratio |
ratio for subsampling, default |
Value
A list
yperm |
Permutation - vectors of 0's and 1's shuffeled |
ysubs |
Subsamples - numeric vectors indicating which samples should be selected |
Author(s)
Ivana Ihnatova, Claudio Lottaz
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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