MAPsig2: Pattern signifficance
In MAMA: Meta-Analysis of MicroArray
Description
Usage
Arguments
Value
Author(s)
References
Description
Function computes significance of observed number of strong and soft matches by
randomly assigning group labels in each study.
Usage
1
MAPsig2(out,value.dis, unique.pat, B = 1000)
Arguments
out
output from function test.group.shuffle
value.dis
binary matrix from T-statistics
unique.pat
unique meta-analysis patterns
B
number of iterations
Value
data.frame with p-values for number of oberved soft and strong matches
Author(s)
Ivana Ihnatova
References
Yang, X., Bentink, S. and Spang, R. 2005, Detecting Common Gene Expression
Patterns in Multiple Cancer Outcome Entities, Biomedical Microdevices,
Vol.7:3, pp. 247-251
MAMA documentation built on Jan. 15, 2017, 3:05 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) References
Description
Function computes significance of observed number of strong and soft matches by randomly assigning group labels in each study.
Usage
1 | MAPsig2(out,value.dis, unique.pat, B = 1000)
|
Arguments
out |
output from function |
value.dis |
binary matrix from T-statistics |
unique.pat |
unique meta-analysis patterns |
B |
number of iterations |
Value
data.frame with p-values for number of oberved soft and strong matches
Author(s)
Ivana Ihnatova
References
Yang, X., Bentink, S. and Spang, R. 2005, Detecting Common Gene Expression Patterns in Multiple Cancer Outcome Entities, Biomedical Microdevices, Vol.7:3, pp. 247-251
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.