MAPsig2: Pattern signifficance

Description Usage Arguments Value Author(s) References

Description

Function computes significance of observed number of strong and soft matches by randomly assigning group labels in each study.

Usage

1
MAPsig2(out,value.dis, unique.pat, B = 1000)

Arguments

out

output from function test.group.shuffle

value.dis

binary matrix from T-statistics

unique.pat

unique meta-analysis patterns

B

number of iterations

Value

data.frame with p-values for number of oberved soft and strong matches

Author(s)

Ivana Ihnatova

References

Yang, X., Bentink, S. and Spang, R. 2005, Detecting Common Gene Expression Patterns in Multiple Cancer Outcome Entities, Biomedical Microdevices, Vol.7:3, pp. 247-251


MAMA documentation built on Jan. 15, 2017, 3:05 p.m.

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