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Segmentation of allele-specific DNA copy number data and detection of regions with abnormal copy number within each parental chromosome. Both tumor-normal paired and tumor-only analyses are supported.
Package details |
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| Author | Henrik Bengtsson [aut, cre, cph], Pierre Neuvial [aut], Venkatraman E. Seshan [aut], Adam B. Olshen [aut], Paul T. Spellman [aut], Richard A. Olshen [aut], Frank E Harrell Jr [ctb] (Weighted quantile estimator adopted from Hmisc::wtd.quantile()) |
| Bioconductor views | CopyNumberVariants Genetics Microarray OneChannel SNP TwoChannel aCGH |
| Maintainer | Henrik Bengtsson <henrikb@braju.com> |
| License | GPL (>= 2) |
| Version | 0.68.0 |
| URL | https://github.com/HenrikBengtsson/PSCBS |
| Package repository | View on CRAN |
| Installation |
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