Compute_objective: Compute value of objective function

Description Usage Arguments

View source: R/FlashQC.R

Description

Compute the value of clustering based on same principles as QuantumClone EM

Usage

1
Compute_objective(tree, nclus, Schrod, conta)

Arguments

tree

Tree from hierarchical clustering

nclus

Number of clusters used for cutting (numeric of length 1)

Schrod

Output from Schrodinger cellularities

conta

Numeric value of contamination fraction in each sample


QuantumClone documentation built on May 2, 2019, 3:03 a.m.