Input_Example: Example generated by QuantumCat

Description Usage Format

Description

A dataset generated by: Input_Example<-QuantumCat(number_of_clones = 4, number_of_mutations = 100, ploidy = "AB",depth = 150, number_of_samples = 2, contamination = c(0,0))

Usage

1

Format

A list of dataframes

SampleName

First column containing the name of the sample

Chr

The chromosome either 1 2 ... X Y or chr1 chr2 ... chrY

Start

The genomic position of the variant

Alt

Number of reads supporting variant allele

Depth

Total number of reads (reference + alternative allele) at position


QuantumClone documentation built on May 2, 2019, 3:03 a.m.