phylo_tree_generation: Data generation

Description Usage Arguments

View source: R/Tree_generation.R


Creates a phylogenetic tree on simple assumptions: 1. There is a common ancestor to all clones 2. Each clone creates a partition of the space. One node will carry mutations, the other will not. A node that is not mutated can be partitioned. 3. Nodes that have less than 2 less than 1 4. Nodes that have less than 10 WARNING: Tree_generation recreates a tree from data while phylo_tree_generation randomly creates a phylogeny


phylo_tree_generation(number_of_clones, number_of_samples)



The wanted number of observable clones (meaning bearing at least 1 mutation)


The number of samples on which the data should be simulated

QuantumClone documentation built on May 29, 2017, 8:04 p.m.