eff-class: Class '"eff"'

In chipPCR: Toolkit of Helper Functions to Pre-Process Amplification Data

Description

An S4 class containing the output effcalc function.

Slots

.Data:

"matrix" containing the "Concentration", "Location" (mean, median), "Deviation" (standard deviation, median absolute deviation), "Coefficient of Variance" (CV, RSD) sequential in the columns.

amplification.efficiency:

"numeric" value representing amplification efficiency.

regression:

"lm" the results of the linear regression and .

correlation.test:

"htest". the correlation test (Pearson) results.

Methods

plot

signature(x = "eff"): plots calculated efficiency. See plot.eff

show

signature(object = "eff"): prints only .Data slot of the object.

summary

signature(object = "eff"): prints information about object prettier than show.

Author(s)

Stefan Roediger, Michal Burdukiewicz

See Also

effcalc, plot.eff,

chipPCR documentation built on March 5, 2021, 9:06 a.m.