plot-eff: Plot 'eff' objects
In chipPCR: Toolkit of Helper Functions to Pre-Process Amplification Data

Description Usage Arguments Details Value Author(s) References See Also

Draws diagnostic plots of the amplification efficiency.

## S4 method for signature 'eff'
plot(x, xlab = "log10(Concentration)", 
                     ylab = "Cq", main = "Efficiency Plot", 
                     trend = TRUE, res.fit = "topright", CI = FALSE, 
                     level = 0.95, type = "p", pch = 19, 
                     er.length = 0.05, col = "black")

`x`	is a `eff` object.
`xlab`	a title for the x axis.
`ylab`	a title for the y axis.
`main`	an overall title for the plot.
`trend`	Setting the option `trend = TRUE` shows the linear regression line in the plot.
`res.fit`	If `res.fit` sets where the results (goodness of fit, amplification efficiency, correlation ) of the linear regression line in the plot should be plotted. Accepts the same location keywords as `legend`

`CI`	Setting the option `CI = TRUE` shows the confidence interval lines in the plot.
`level`	Tolerance/confidence level.
`type`	is a graphical parameter setting the plot use lines, points or both (see `plot`).
`pch`	is a graphical parameter used to define the symbol used in the plot.
`er.length`	`length` is a graphical parameter used to define the length of the error bar used in the plot.
`col`	`col` is a graphical parameter used to define the color of the points on the plot.