Description Usage Arguments Details Value Author(s) Examples
Plots many curves on one plot in table-like fashion.
1 2 |
x |
is the column of a data frame for the cycle or data.frame/matrix with whole data. |
y |
are multiple columns of fluorescence values from a
|
cyc |
is the index of column containing the cycle data.
Used only if |
fluo |
are the columns containing the fluorescence data.
Used only if |
one.plot |
|
nrow |
number of rows in plot. Applies only if |
CPP |
logical, if |
... |
additional arguments to |
plotCurves
is a function for the quick assessment of amplification
curve raw data in an orthogonal matrix.
None.
Stefan Roediger, Michal Burdukiewicz, Konstantin A. Blagodatskikh
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 | # First example
plotCurves(VIMCFX96_60[, 1], VIMCFX96_60[, 2L:16], type = "l")
# Second example
y <- VIMCFX96_60[, 2L:16]
# Introduce some missing values.
y[c(1,4,5,6,23,34), c(2,4,9,15)] <- NA
plotCurves(VIMCFX96_60[, 1], y, nrow = 4, type = "l")
# Third example
# Same as second example but the CPP option is set to TRUE.
# Noise and missing values will be removed.
y <- VIMCFX96_60[, 2L:16]
# Introduce some missing values.
y[c(1,4,5,6,23,34), c(2,4,9,15)] <- NA
plotCurves(VIMCFX96_60[, 1], y, nrow = 4, CPP = TRUE, type = "l")
# Fourth example
plotCurves(VIMCFX96_60, y = NULL, one.plot = TRUE, type = "l")
plotCurves(VIMCFX96_60, y = NULL, one.plot = FALSE, type = "l")
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.