Man pages for chipPCR
Toolkit of Helper Functions to Pre-Process Amplification Data

AmpSimAmplification curve simulator
AmpSim.guiAmplification Curve Simulation Graphical User Interface
amptest-classClass '"amptest"'
amptesterAmplification test
amptester.guiAmplification Test Graphical User Interface
bg-classClass '"bg"'
bg.maxSimple function to detect and correct the background range
C126EG595qPCR Experiment for the Amplification of HPRT1 Using the...
C126EG685qPCR Experiment for the Amplification of HPRT1 Using the...
C127EGHPqPCR Experiment for the Amplification of MLC-2v Using the...
C17Helicase Dependent Amplification of HPRT1 at Different...
C316.ampqPCR Experiment for the Amplification of adk Using the...
C316.melt.hrMelting Curves (resolution: 0.2 degrees Celsius / step) for...
C316.melt.lrMelting Curves (resolution: 0.5 degrees Celsius / step) for...
C317.ampqPCR Experiment for the Amplification of adk Using the...
C317.melt.hrMelting Curves (resolution: 0.1 degrees Celsius / step) for...
C317.melt.lrMelting Curves (resolution: 0.5 degrees Celsius / step) for...
C54qPCR Experiment for the amplification of MLC-2v using the...
C60.ampqPCR Experiment for the Amplification of MLC-2v and Vimentin...
C60.meltMelt Curves MLC-2v and Vimentin for the qPCR Experiment...
C67Helicase Dependent Amplification of HPRT1 with different...
C81Helicase Dependent Amplification of pCNG1 using the VideoScan...
C85Helicase Dependent Amplification of Vimentin using the...
capillaryPCRcapillary convective PCR
CD74Quantitative PCR with a hydrolysis probe and DNA binding dye
CD75Helicase Dependent Amplification in the VideoScan HCU
chipPCR.datasetsOverview for data sets of the 'chipPCR' package
chipPCR-packageToolkit of functions to pre-process amplification data
CPPCurve Pre-processor
der-classClass '"der"'
Eff1000Highly Replicate Number Amplification Curves
Eff625Highly Replicate Number Amplification Curves
Eff750Highly Replicate Number Amplification Curves
Eff875Highly Replicate Number Amplification Curves
effcalcAnalysis of the amplification efficiency
eff-classClass '"eff"'
fixNAImpute missing values into a column of amplification data
humanraterhumanrater, a graphical interface to rate curves
inderInterpolate derivatives
LAMPreal-time loop-mediated isothermal amplification (LAMP) by...
lm.coefsCompute linear model coefficients
MFIaggrMultiple comparison of the cycle dependent variance of the...
MFIaggr.guiMultiple Comparison of the Cycle Dependent Variance -...
normalizerNormalize data
plot-bgPlot 'bg' objects
plotCurvesPlot Curves in an Orthogonal Matrix
plot-derPlot 'der' objects
plot-effPlot 'eff' objects
plot-refMFIPlot 'refMFI' objects
refMFI-classClass '"refMFI"'
rounderRound der objects
RPARecombinase polymerase amplification (RPA) by Lutz et...
smootherWrapper for Several Smoothers of Amplification Data
summary-bgSummary 'bg' objects
summary-derSummary 'der' objects
summary-refMFISummary 'refMFI' objects
th-classClass '"th"'
th.cycThreshold Cycle
VIMCFX96_60Amplification Reaction Using the Bio-Rad CFX96
VIMCFX96_69Amplification Reaction Using the Bio-Rad CFX96
VIMCFX96_meltcurveMelting Curve Measured with the Bio-Rad CFX96
VIMiQ5_595Amplification Reaction Using the Bio-Rad iQ5
VIMiQ5_685Amplification Reaction Using the Bio-Rad iQ5
VIMiQ5_meltMelting Curve Measured with the Bio-Rad iQ5
chipPCR documentation built on May 29, 2017, 6:46 p.m.