th-class: Class '"th"'

In chipPCR: Toolkit of Helper Functions to Pre-Process Amplification Data

Description

An S4 class containing the output th.cyc function.

Value

A class for calculated results (Ct value and fluorescence) from amplifications curve data of a qPCR experiment.

Slots

.Data:

"matrix" is a matrix containing the threshold cycle and threshold fluorescence.

stats:

"summary.lm" contains linear model used for Ct estimation.

input:

"matrix" input data for linear model.

Methods

summary

signature(object = "th"): prints summary of the object.

show

signature(object = "th"): prints only .Data slot of the object.

Author(s)

Stefan Roediger, Michal Burdukiewicz

See Also

th.cyc

Examples

res <- th.cyc(VIMCFX96_69[, 1], VIMCFX96_69[, 3], r = 2300)
summary(res)
slot(res, "input")

chipPCR documentation built on March 5, 2021, 9:06 a.m.