rounder: Round der objects

In chipPCR: Toolkit of Helper Functions to Pre-Process Amplification Data

Description

inder calculates numeric derivatives on smoothed data which results in data points not observable in reality. The rounder function averages such result to the real values of cycle number.

Usage

rounder(object, cyc = 1)

Arguments

object	a class der object.
cyc	a column containing cycle numbers after smoothing. In case of objects created by the inder function, it is the first column.

Value

An object of the class der containing cycle number and averaged values of the fluorescence, first derivative and second derivative.

Author(s)

Stefan Roediger, Michal Burdukiewicz

See Also

inder, der

Examples

isPCR <- AmpSim(cyc = 1:40)
res <- inder(isPCR)
rd <- rounder(res)
plot(rd)

chipPCR documentation built on March 5, 2021, 9:06 a.m.