downsampleClone: 'downsampleClone' Down-sample clone to maximum tip/switch...

View source: R/TreeFunctions.R

downsampleCloneR Documentation

downsampleClone Down-sample clone to maximum tip/switch ratio

Description

downsampleClone Down-sample clone to maximum tip/switch ratio

Usage

downsampleClone(clone, trait, tip_switch = 20, tree = NULL)

Arguments

clone

an airrClone object

trait

trait considered for rarefaction getTrees

tip_switch

maximum tip/switch ratio

tree

a phylo tree object correspond to clone

Value

A vector with sequence for each locus at a specified node in tree.


dowser documentation built on May 29, 2024, 3:06 a.m.