exportTrees: Exports the phylogenetic trees from the airrClone object
In dowser: B Cell Receptor Phylogenetics Toolkit

View source: R/TreeFunctions.R

exportTrees

R Documentation

Exports the phylogenetic trees from the airrClone object

Description

exportTrees Exports phylogenetic trees

Usage

exportTrees(clones, filepath, tree_column = "trees", ...)

Arguments

`clones`	tibble `airrClone` objects, the output of formatClones
`filepath`	The file path for where the trees will be saved
`tree_column`	The name of the column that contains the trees
`...`	additional arguments to be passed

dowser documentation built on Nov. 5, 2025, 6:36 p.m.

dowser index

Package overview README.md Building trees with paired heavy and light chain data Build Lineage Trees Build Time Trees Using TyCHE and BEAST Discrete Trait Analysis Measurable evolution Plotting Lineage Trees Quickstart Reconstruct Clonal Germlines Reconstruct Intermediate Sequences Build B cell lineage trees Building trees with paired heavy and light chain data Build Time Trees Using TyCHE and BEAST Detect ongoing B cell evolution Discrete trait analysis Dowser: Simple lineage tree construction Plot B cell lineage trees Reconstruct clonal germline sequences Reconstruct intermediate sequences Using data from non-B cells

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