getupload3: Get the csv files to be submitted to Metaboanalyst
In enviGCMS: GC/LC-MS Data Analysis for Environmental Science

getupload3

R Documentation

Get the csv files to be submitted to Metaboanalyst

Description

Get the csv files to be submitted to Metaboanalyst

Usage

getupload3(list, name = "Peaklist")

Arguments

`list`	list with data as peaks list, mz, rt and group information
`name`	file name

Value

dataframe with data needed for Metaboanalyst if your want to perform local analysis.

Examples

## Not run: 
library(faahKO)
cdfpath <- system.file('cdf', package = 'faahKO')
xset <- getdata2(cdfpath,
ppp = xcms::MatchedFilterParam(),
rtp = xcms::ObiwarpParam(),
gpp = xcms::PeakDensityParam())
xset <- enviGCMS::getmzrt2(xset)
getupload3(xset)

## End(Not run)

enviGCMS documentation built on Feb. 16, 2023, 8:08 p.m.