plotmsrt: Plot EIC of certain m/z and return dataframe for integration

In enviGCMS: GC/LC-MS Data Analysis for Environmental Science

Plot EIC of certain m/z and return dataframe for integration

Description

Plot EIC of certain m/z and return dataframe for integration

Usage

plotmsrt(data, ms, rt, n = FALSE)

Arguments

data	imported data matrix of GC-MS
ms	m/z to be extracted
rt	vector range of the retention time
n	logical smooth or not

Value

dataframe with with the first column RT and second column intensity of the SIM ions.

Examples

## Not run: 
matrix <- getmd(rawdata)
plotmsrt(matrix,rt = c(500,1000),ms = 300)

## End(Not run)

enviGCMS documentation built on Feb. 16, 2023, 8:08 p.m.