Description Usage Arguments Details Value Author(s) References Examples
View source: R/s03_all_functions.R
Reorder a mutationSignatures, mutationCounts, data.frame, or matrix object by sorting entries by mutation type.
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x |
an object storing mutation count data |
This function is part of the user-interface set of tools included in mutSignatures. This is an exported function.
an object of the same class as x, with entries sorted according to mutation types.
Damiano Fantini, damiano.fantini@gmail.com
More information and examples about mutational signature analysis can be found here:
GitHub Repo: https://github.com/dami82/mutSignatures/
More info and examples about the mutSignatures R library: https://www.data-pulse.com/dev_site/mutsignatures/
Sci Rep paper, introducing mutS: https://www.nature.com/articles/s41598-020-75062-0/
Oncogene paper, Mutational Signatures Operative in Bladder Cancer: https://www.nature.com/articles/s41388-017-0099-6
1 2 3 | A <- data.frame(S1=1:5, S2=5:1, S3=1:5)
rownames(A) <- c("A[A>T]G", "A[C>G]G", "T[A>T]G", "T[C>G]T", "T[C>G]G")
mutSignatures::sortByMutations(A)
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