gammatest: Gamma test of Pybus & Harvey (2000)
In phytools: Phylogenetic Tools for Comparative Biology (and Other Things)
gammatest R Documentation
Gamma test of Pybus & Harvey (2000)
Description
Conducts \gamma-test of Pybus & Harvey (2000).
Usage
gammatest(x)
Arguments
x
an object of class "ltt" resulting from a call of the function ltt.
Value
A an object of class "gammatest" consisting of a list that contains:
gamma
a value for the \gamma-statistic.
p
two-tailed P-value for the \gamma-test.
Author(s)
Liam Revell liam.revell@umb.edu
References
Pybus, O. G., and P. H. Harvey (2000) Testing macro-evolutionary models using incomplete molecular phylogenies. Proc. R. Soc. Lond. B, 267, 2267-2272.
Revell, L. J. (2012) phytools: An R package for phylogenetic comparative biology (and other things). Methods Ecol. Evol., 3, 217-223.
See Also
ltt, mccr
Examples
data(darter.tree)
gammatest(ltt(darter.tree,plot=FALSE))
phytools documentation built on Nov. 10, 2023, 1:08 a.m.
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| gammatest | R Documentation |
Gamma test of Pybus & Harvey (2000)
Description
Conducts \gamma-test of Pybus & Harvey (2000).
Usage
gammatest(x)
Arguments
x |
an object of class |
Value
A an object of class "gammatest" consisting of a list that contains:
gamma |
a value for the |
p |
two-tailed P-value for the |
Author(s)
Liam Revell liam.revell@umb.edu
References
Pybus, O. G., and P. H. Harvey (2000) Testing macro-evolutionary models using incomplete molecular phylogenies. Proc. R. Soc. Lond. B, 267, 2267-2272.
Revell, L. J. (2012) phytools: An R package for phylogenetic comparative biology (and other things). Methods Ecol. Evol., 3, 217-223.
See Also
ltt, mccr
Examples
data(darter.tree)
gammatest(ltt(darter.tree,plot=FALSE))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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