multiC | R Documentation |
Computes phylogenetic covariance matrices from a "simmap"
object.
multiC(tree, internal=FALSE)
tree |
an object of class |
internal |
logical value indicating whether or not internal nodes should be returned. |
This function takes a modified "phylo"
object as input and returns a set of so-called phylogenetic covariance matrices (e.g., see vcv.phylo
) as a list: one for each mapped state.
Used internally by multiple phytools functions, such as brownie.lite
.
A list of matrices.
Liam Revell liam.revell@umb.edu
Revell, L. J. (2024) phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things). PeerJ, 12, e16505.
evolvcv.lite
, read.simmap
, vcvPhylo
, vcv.phylo
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