plotTree.datamatrix: Plot a tree with a discrete character data matrix at the tips

In phytools: Phylogenetic Tools for Comparative Biology (and Other Things)

Plot a tree with a discrete character data matrix at the tips

Description

Plots a phylogeny next to a matrix of discrete character data.

Usage

plotTree.datamatrix(tree, X, ...)

Arguments

tree	an object of class "phylo".
X	a data frame with columns as factors.
...	optional arguments.

Value

Invisibly returns a list containing the font size, a list of the colors used for each column of the plotted data matrix, and the x-coordinate of the rightmost edge of the matrix.

Author(s)

Liam Revell [e-mail]

References

Revell, L. J. (2012) phytools: An R package for phylogenetic comparative biology (and other things). Methods Ecol. Evol., 3, 217-223.

See Also

dotTree, phylo.heatmap

phytools documentation built on Nov. 10, 2023, 1:08 a.m.