plotTree | R Documentation |
Essentially a wrapper for plotSimmap
. Arguments in ...
are passed to plotSimmap
, with the exception of optional argument color
which is used to determine the plotted color of the branch lengths of the tree.
plotTree(tree, ...)
tree |
a phylogenetic tree in |
... |
optional arguments. |
Plots a rooted phylogram or cladogram.
This function plots a rooted phylogram or cladogram.
Liam Revell liam.revell@umb.edu
Revell, L. J. (2014) Graphical methods for visualizing comparative data on phylogenies. Chapter 4 in Modern phylogenetic comparative methods and their application in evolutionary biology: Concepts and practice (L. Z. Garamszegi ed.), pp. 77-103.
Revell, L. J. (2024) phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things). PeerJ, 12, e16505.
plot.phylo
, plotSimmap
data(vertebrate.tree)
plotTree(vertebrate.tree,fsize=1.2,ftype="i")
par(mar=c(5.1,4.1,4.1,2.1)) ## reset margins to default
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