Files in poppr

Genetic Analysis of Populations with Mixed Reproduction

NEWS.md README.md R/imsn.R R/messages.r R/data_subset.r R/aaaMLGclass.R R/distances.r R/internal_methods.R R/classes.r R/poppr.R R/bootstraping.R R/visualizations.r R/internal.r R/zzz.r R/msn_handlers.R R/aaaMLGmethods.R R/print_methods.r R/round_robin.R R/amova.r R/upgma.R R/mlg.r R/methods.r R/check_data.R R/global_memory.r R/filter_stats.R R/ia_jackknife.R R/bitwise.r R/Index_calculations.r R/pipe.R R/sample_schemes.r R/bruvo.r R/file_handling.r inst/doc/algo.pdf inst/doc/algo.R inst/shiny/utils.R inst/shiny/msn_explorer/ui.R inst/shiny/msn_explorer/server.R tests/test-all.R tests/testthat/test-private.R tests/testthat/test-locustable.R tests/testthat/test-poppr.R tests/testthat/test-informloci.R tests/testthat/test-values.R tests/testthat/test-winia.R tests/testthat/test-filter.R tests/testthat/test-errors.R tests/testthat/test-trees.R tests/testthat/test-greyscale.R tests/testthat/test-missing.R tests/testthat/test-import.R tests/testthat/test-make_haplotypes.R tests/testthat/test-replen.R tests/testthat/test-jackia.R tests/testthat/test-plots.R tests/testthat/test-distpop.R tests/testthat/test-round-robin.R tests/testthat/test-popsub.R tests/testthat/test-bitwise.R tests/testthat/test-snpclone.R tests/testthat/test-polyploids.R tests/testthat/test-incomp.R tests/testthat/test-genclone.R tests/testthat/test-sampling.R tests/testthat/test-bootclass.R tests/testthat/test-genotype_curve.R tests/testthat/test-colors.R tests/testthat/test-MLG-class.R tests/testthat/test-mlg.R tests/testthat/test-msn.R tests/testthat/test-amova.R vignettes/jalapeno-poppers.pdf vignettes/getfile.pdf man/genclone-class.Rd man/test_replen.Rd man/diss.dist.Rd man/pgen.Rd man/win.ia.Rd man/mlg.filter.Rd man/cutoff_predictor.Rd man/MLG-class.Rd man/bitwise.ia.Rd man/info_table.Rd man/aboot.Rd man/mll-method.Rd man/genind2genalex.Rd man/boot.ia.Rd man/read.genalex.Rd man/genclone-method.Rd man/greycurve.Rd man/bruvo.msn.Rd man/poppr.amova.Rd man/bruvomat-methods.Rd man/recode_polyploids.Rd man/Aeut.Rd man/plot_filter_stats.Rd man/poppr.all.Rd man/bruvo.boot.Rd man/unique-methods.Rd man/partial_clone.Rd man/upgma.Rd man/monpop.Rd man/poppr_has_parallel.Rd man/samp.ia.Rd man/mll.custom.Rd man/mlg.Rd man/bruvomat-class.Rd man/rraf.Rd man/old2new_genclone.Rd man/poppr.Rd man/private_alleles.Rd man/snpclone-coercion-methods.Rd man/Pram.Rd man/getfile.Rd man/plot_poppr_msn.Rd man/levels-methods.Rd man/incomp.Rd man/grapes-greater-than-grapes.Rd man/diversity_ci.Rd man/Pinf.Rd man/psex.Rd man/imsn.Rd man/ia.Rd man/mll.reset-method.Rd man/poppr.plot.Rd man/diversity_boot.Rd man/poppr.msn.Rd man/coercion-methods.Rd man/rrmlg.Rd man/popsub.Rd man/missingno.Rd man/filter_stats.Rd man/bootgen-methods.Rd man/genotype_curve.Rd man/informloci.Rd man/bootgen-class.Rd man/rare_allele_correction.Rd man/make_haplotypes-method.Rd man/shufflepop.Rd man/bitwise.dist.Rd man/bruvo.dist.Rd man/diversity_stats.Rd man/poppr-package.Rd man/genetic_distance.Rd man/snpclone-method.Rd man/MLG-method.Rd man/is.clone.Rd man/clonecorrect.Rd man/fix_replen.Rd man/MLG-accessors.Rd man/locus_table.Rd