bgc.sel.factor: BGC+selection factor

Description Usage Arguments Value Author(s)

View source: R/treeModel.R

Description

BGC+selection factor

Usage

1

Arguments

x

The cumulative effect of bgc and selection. If bgc and sel are population-scaled parameters describing biased gene conversion and selection, then x should be sel+bgc for strong mutations, sel-bgc for weak mutations, a and sel for neutral mutations.

Value

x/(1-e^(-x)), the factor to scale the rate matrix entry by.

Author(s)

Melissa J. Hubisz


rphast documentation built on May 1, 2019, 9:26 p.m.