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inst/examples/plot-feat.R
In rphast: Interface to 'PHAST' Software for Comparative Genomics
exampleArchive <- system.file("extdata", "examples.zip", package="rphast")
featFile <- "gencode.ENr334-100k.gff"
unzip(exampleArchive, featFile)
f <- read.feat(featFile)
# note that plot(f) does not work because features are stored as data.frames
plot.feat(f[f$feature=="CDS",])
unlink(featFile)
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rphast documentation built on May 1, 2019, 9:26 p.m.
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exampleArchive <- system.file("extdata", "examples.zip", package="rphast")
featFile <- "gencode.ENr334-100k.gff"
unzip(exampleArchive, featFile)
f <- read.feat(featFile)
# note that plot(f) does not work because features are stored as data.frames
plot.feat(f[f$feature=="CDS",])
unlink(featFile)
Try the rphast package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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