reduce_to_vargenes: Reduce each cell type's expression matrix to just the...
In scITD: Single-Cell Interpretable Tensor Decomposition
reduce_to_vargenes R Documentation
Reduce each cell type's expression matrix to just the significantly variable genes.
Generally, this should be done through calling the form_tensor() wrapper function.
Description
Reduce each cell type's expression matrix to just the significantly variable genes.
Generally, this should be done through calling the form_tensor() wrapper function.
Usage
reduce_to_vargenes(container)
Arguments
container
environment Project container that stores sub-containers
for each cell type as well as results and plots from all analyses
Value
The project container with pseudobulked matrices reduced to only
the most variable genes.
scITD documentation built on Sept. 8, 2023, 5:11 p.m.
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| reduce_to_vargenes | R Documentation |
Reduce each cell type's expression matrix to just the significantly variable genes. Generally, this should be done through calling the form_tensor() wrapper function.
Description
Reduce each cell type's expression matrix to just the significantly variable genes. Generally, this should be done through calling the form_tensor() wrapper function.
Usage
reduce_to_vargenes(container)
Arguments
container |
environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses |
Value
The project container with pseudobulked matrices reduced to only the most variable genes.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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