Description Usage Format Details Source Examples
The example data provided in our package are transcriptomic profiles of MD-DCs from 9 patients with AS and 10 healthy controls. DE gene statistics group 75 genes identified by LIMMA. Samples description is also provided.
1 | data("SpADEGenes")
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A data frame with 75 observations on the following 5 variables.
GeneSymbol
HGNC gene symbol
EnsemblId
Gene Ensembl ID
P.Value
Given by LIMMA
Fold.Change
Given by LIMMA
logFC
log2(Fold.Change)
This matrix groups the fold changes of p-values given by LIMMA for each gene, between patients and controls adjusted for all LPS time stimulations.
Talpin, A. et al. Monocyte-derived dendritic cells from HLA-B27+ axial spondyloarthritis (SpA) patients display altered functional capacity and deregulated gene expression. Arthritis Res. Ther. 16, 417 (2014).
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