get.base.substitution: Get base substitution
In varitas: Variant Calling in Targeted Analysis Sequencing Data
Description
Usage
Arguments
Value
View source: R/helper_functions.R
Description
Get base substitution represented by pyrimidine in base pair.
If more than one base in REF/ALT (i.e. MNV or indel rather than SNV), NA will be returned
Usage
1
get.base.substitution(ref, alt)
Arguments
ref
Vector of reference bases
alt
Vector of alternate bases
Value
base.substitutions
varitas documentation built on Nov. 14, 2020, 1:07 a.m.
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Description Usage Arguments Value
View source: R/helper_functions.R
Description
Get base substitution represented by pyrimidine in base pair. If more than one base in REF/ALT (i.e. MNV or indel rather than SNV), NA will be returned
Usage
1 | get.base.substitution(ref, alt)
|
Arguments
ref |
Vector of reference bases |
alt |
Vector of alternate bases |
Value
base.substitutions
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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