get.file.path: get.file.path

In varitas: Variant Calling in Targeted Analysis Sequencing Data

Description

Get absolute path to sample-specific file for one or more samples

Usage

get.file.path(sample.ids, directory, extension = NULL,
  allow.multiple = FALSE, allow.none = FALSE)

Arguments

sample.ids	Vector of sample IDs to match filename on
directory	Path to directory containing files
extension	String giving extension of file
allow.multiple	Boolean indicating whether to allow multiple matching files. Defaults to false, which throws an error if the query matches more than one file.
allow.none	Boolean indicating whether to allow no matching files. Defaults to false, which throws an error if the query does not match any files.

Value

Paths to matched files

varitas documentation built on Nov. 14, 2020, 1:07 a.m.