get.miniseq.sample.files: get.miniseq.sample.files
In varitas: Variant Calling in Targeted Analysis Sequencing Data

Get files for a sample in a directory, ensuring there's only a single match per sample ID.

1 2	get.miniseq.sample.files(sample.ids, directory, file.suffix = "_S\\d{1,2}_.*")

`sample.ids`	Vector of sample ids. Should form first part of file name
`directory`	Directory where files can be found
`file.suffix`	Regex expression for end of file name. For example, ‘file.suffix = ’_S\d1,2_._R1_.'' will match R1 files.1 files.

Character vector of file paths

varitas documentation built on Nov. 14, 2020, 1:07 a.m.

varitas index

The VariTAS Pipeline" What Does This Error Mean?"

Note that we can't provide technical support on individual packages. You should contact the package authors for that.

Description