plotVariability: plotVariability
In GreenleafLab/chromVAR: Chromatin Variation Across Regions

Description Usage Arguments Value Author(s) Examples

plot variability of motifs/etc

1 2	plotVariability(variability, xlab = "Sorted TFs", n = 3, labels = variability$name, use_plotly = interactive())

`variability`	output from `computeVariability`
`xlab`	label for x-axis (default is 'Sorted TFs')
`n`	number of toppoints to label?
`labels`	names of sets. if not given, uses rownames of variability
`use_plotly`	make plot interactive (using plotly)

ggplot or plotly object, depending on whether use_plotly is TRUE

Alicia Schep

# Load very small example results from computeDeviations
data(mini_dev, package = "chromVAR")
variability <- computeVariability(mini_dev)
var_plot <- plotVariability(variability, use_plotly = FALSE)