run.cutreeDynamic: run dynamicTreeCut::cutreeDynamic on rows of the given matrix

In Japrin/sscVis: simpler single cell RNAseq data Visualization

run dynamicTreeCut::cutreeDynamic on rows of the given matrix

Description

run dynamicTreeCut::cutreeDynamic on rows of the given matrix

Usage

run.cutreeDynamic(
  dat,
  method.hclust = "ward.D2",
  method.distance = "spearman",
  ...
)

Arguments

dat	data frame or matrix;
method.hclust	character; clustering method for hclust [default: "ward.D2"]
method.distance	character; distance method for hclust [default: "spearman"]
...	parameters passed to dynamicTreeCut::cutreeDynamic

Details

dynamicTreeCut::cutreeDynamic on rows of the given matrix

Value

a matrix with dimention as input ( samples in rows and variables in columns)

Japrin/sscVis documentation built on March 5, 2025, 10:23 a.m.