ssc.plot.cor: Plot correlation.
In Japrin/sscVis: simpler single cell RNAseq data Visualization

ssc.plot.cor

R Documentation

Plot correlation.

Description

Plot correlation.

Usage

ssc.plot.cor(
  obj,
  feat1,
  feat2,
  type1 = "gene",
  type2 = "gene",
  assay.name = "exprs",
  legend.w = 1,
  legend.ncol = NULL,
  add.legend = F,
  out.prefix = NULL,
  vector.friendly = F,
  ...
)

Arguments

`obj`	object of `SingleCellExperiment` class
`feat1`	character; feature on x axis
`feat2`	character; feature on y axis
`type1`	character; feature type on x axis. (default: "gene")
`type2`	character; feature type on y axis. (default: "gene")
`assay.name`	character; which assay (default: "exprs")
`legend.w`	numeric; adjust legend width (default: 1)
`legend.ncol`	integer; (default: NULL)
`add.legend`	logical; (default: F)
`out.prefix`	character; output prefix. (default: NULL)
`vector.friendly`	logical; output vector friendly figure (default: FALSE)
`...`	parameter passed to geom_point