STS_sorting_wrapper: A wrapper function for Side-to-Side (STS) sorting.
In JinmiaoChenLab/uSORT: uSORT: A self-refining ordering pipeline for gene selection
Description
Usage
Arguments
Value
Description
A wrapper function for Side-to-Side (STS) sorting as proposed in [Tsafrir et al. 2005].
Usage
1
STS_sorting_wrapper(expr, no_randomization = 10)
Arguments
expr
An expresssion matrix containing n-rows of cells and m-cols of genes.
no_randomization
An integer number indicating the number of repeated sorting, each
of which uses a randomaly selected initial cell ordering.
Value
A list containing permutated.expr(data frame) and best.cost(a numeric value).
JinmiaoChenLab/uSORT documentation built on May 7, 2019, 10:53 a.m.
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Description Usage Arguments Value
Description
A wrapper function for Side-to-Side (STS) sorting as proposed in [Tsafrir et al. 2005].
Usage
1 | STS_sorting_wrapper(expr, no_randomization = 10)
|
Arguments
expr |
An expresssion matrix containing n-rows of cells and m-cols of genes. |
no_randomization |
An integer number indicating the number of repeated sorting, each of which uses a randomaly selected initial cell ordering. |
Value
A list containing permutated.expr(data frame) and best.cost(a numeric value).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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