JinmiaoChenLab/uSORT: uSORT: A self-refining ordering pipeline for gene selection

This package is designed to uncover the intrinsic cell progression path from single-cell RNA-seq data. It incorporates data pre-processing, preliminary PCA gene selection, preliminary cell ordering, feature selection, refined cell ordering, and post-analysis interpretation and visualization.

Getting started

Package details

AuthorMai Chan Lau, Hao Chen, Jinmiao Chen
Bioconductor views CellBiology DNASeq GUI RNASeq
MaintainerHao Chen <[email protected]>
LicenseArtistic-2.0
Version0.99.4
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("JinmiaoChenLab/uSORT")
JinmiaoChenLab/uSORT documentation built on May 8, 2017, 11:30 p.m.