Description Usage Arguments Value

A wrapper function for Neighborhood sorting as proposed in [Tsafrir et al. 2005].

1 | ```
neighborhood_sorting_wrapper(expr, sigma_width = 1, no_randomization = 10)
``` |

`expr` |
An expresssion matrix containing n-rows of cells and m-cols of genes. |

`sigma_width` |
An integer number determining the degree of spread of the gaussian distribution which is used for computing weight matrix for Neighborhood sorting method. |

`no_randomization` |
An integer number indicating the number of repeated sorting, each of which uses a randomaly selected initial cell ordering. |

A list containing `permutated.expr`

(data frame) and `best.cost`

(a numeric value).

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