decompress: Decompress a file

In NathanSkene/MAGMA_Celltyping: Find Causal Cell-Types Underlying Complex Trait Genetics

Decompress a file

Description

Decompress a gzipped (.gz) or bgzipped (.bgz) file.

Usage

decompress(
  path_formatted,
  remove = FALSE,
  overwrite = TRUE,
  storage_dir = tempdir(),
  verbose = TRUE
)

Arguments

path_formatted	Path to compressed file.
remove	If TRUE, the input file is removed afterward, otherwise not.
overwrite	If TRUE and the output file already exists, the file is silently overwritten, otherwise an exception is thrown (unless skip is TRUE).
storage_dir	Folder in which to store the GWAS summary stats.
verbose	Print messages.

Value

Path to decompressed file.

NathanSkene/MAGMA_Celltyping documentation built on Aug. 21, 2023, 8:55 a.m.