get_genome_ref_piggyback: Download genome ref: piggyback

View source: R/get_genome_ref_piggyback.R

get_genome_ref_piggybackR Documentation

Download genome ref: piggyback

Description

Download and decompress the genome reference needed to run map_snps_to_genes, If the file already exists, it will simply return the path.

Usage

get_genome_ref_piggyback(genome_ref_dir, verbose = TRUE)

Arguments

genome_ref_dir

Folder to download reference to.

verbose

Print messages.

Source

genome_ref_path <- MAGMA.Celltyping::get_genome_ref(method = "magma") piggyback::pb_upload(file = genome_ref_path, repo = "neurogenomics/MAGMA_Celltyping", overwrite = TRUE)


NathanSkene/MAGMA_Celltyping documentation built on Aug. 21, 2023, 8:55 a.m.