Files in PhanstielLab/bedtoolsr
Bedtools Wrapper

.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/bt.annotate.R R/bt.bamtobed.R R/bt.bamtofastq.R R/bt.bed12tobed6.R R/bt.bedpetobam.R R/bt.bedtobam.R R/bt.closest.R R/bt.cluster.R R/bt.complement.R R/bt.coverage.R R/bt.expand.R R/bt.fisher.R R/bt.flank.R R/bt.genomecov.R R/bt.getfasta.R R/bt.groupby.R R/bt.igv.R R/bt.intersect.R R/bt.jaccard.R R/bt.links.R R/bt.makewindows.R R/bt.map.R R/bt.maskfasta.R R/bt.merge.R R/bt.multicov.R R/bt.multiinter.R R/bt.nuc.R R/bt.overlap.R R/bt.pairtobed.R R/bt.pairtopair.R R/bt.random.R R/bt.reldist.R R/bt.sample.R R/bt.shift.R R/bt.shuffle.R R/bt.slop.R R/bt.sort.R R/bt.spacing.R R/bt.split.R R/bt.subtract.R R/bt.summary.R R/bt.tag.R R/bt.unionbedg.R R/bt.window.R R/createOptions.R R/deleteTempFiles.R R/establishPaths.R R/zzz.R README.md
bedtoolsr.Rproj
dev/anomalies.json
dev/createOptions.R dev/deleteTempFiles.R dev/document.R dev/establishPaths.R
dev/makePackage.py
dev/zzz.R
extdata/dm6
extdata/hg19
extdata/hg38
extdata/mm10
extdata/mm9
img/exampleResults.png
inst/tests/testthat.R inst/tests/testthat/test-bt.annotate.R inst/tests/testthat/test-bt.closest.R inst/tests/testthat/test-bt.cluster.R inst/tests/testthat/test-bt.complement.R inst/tests/testthat/test-bt.coverage.R inst/tests/testthat/test-bt.expand.R inst/tests/testthat/test-bt.fisher.R inst/tests/testthat/test-bt.flank.R inst/tests/testthat/test-bt.genomecov.R inst/tests/testthat/test-bt.groupby.R inst/tests/testthat/test-bt.intersect.R inst/tests/testthat/test-bt.jaccard.R inst/tests/testthat/test-bt.makewindows.R inst/tests/testthat/test-bt.map.R inst/tests/testthat/test-bt.merge.R inst/tests/testthat/test-bt.overlap.R inst/tests/testthat/test-bt.shift.R inst/tests/testthat/test-bt.shuffle.R inst/tests/testthat/test-bt.slop.R inst/tests/testthat/test-bt.sort.R inst/tests/testthat/test-bt.spacing.R inst/tests/testthat/test-bt.subtract.R inst/tests/testthat/test-bt.unionbedg.R inst/tests/testthat/test-bt.window.R man/bt.annotate.Rd man/bt.bamtobed.Rd man/bt.bamtofastq.Rd man/bt.bed12tobed6.Rd man/bt.bedpetobam.Rd man/bt.bedtobam.Rd man/bt.closest.Rd man/bt.cluster.Rd man/bt.complement.Rd man/bt.coverage.Rd man/bt.expand.Rd man/bt.fisher.Rd man/bt.flank.Rd man/bt.genomecov.Rd man/bt.getfasta.Rd man/bt.groupby.Rd man/bt.igv.Rd man/bt.intersect.Rd man/bt.jaccard.Rd man/bt.links.Rd man/bt.makewindows.Rd man/bt.map.Rd man/bt.maskfasta.Rd man/bt.merge.Rd man/bt.multicov.Rd man/bt.multiinter.Rd man/bt.nuc.Rd man/bt.overlap.Rd man/bt.pairtobed.Rd man/bt.pairtopair.Rd man/bt.random.Rd man/bt.reldist.Rd man/bt.sample.Rd man/bt.shift.Rd man/bt.shuffle.Rd man/bt.slop.Rd man/bt.sort.Rd man/bt.spacing.Rd man/bt.split.Rd man/bt.subtract.Rd man/bt.summary.Rd man/bt.tag.Rd man/bt.unionbedg.Rd man/bt.window.Rd man/createOptions.Rd man/deleteTempFiles.Rd man/establishPaths.Rd
paper/paper.bib
paper/paper.md tests/testthat.R tests/testthat/test-bt.annotate.R tests/testthat/test-bt.closest.R tests/testthat/test-bt.cluster.R tests/testthat/test-bt.complement.R tests/testthat/test-bt.coverage.R tests/testthat/test-bt.expand.R tests/testthat/test-bt.fisher.R tests/testthat/test-bt.flank.R tests/testthat/test-bt.genomecov.R tests/testthat/test-bt.groupby.R tests/testthat/test-bt.intersect.R tests/testthat/test-bt.jaccard.R tests/testthat/test-bt.makewindows.R tests/testthat/test-bt.map.R tests/testthat/test-bt.merge.R tests/testthat/test-bt.overlap.R tests/testthat/test-bt.shift.R tests/testthat/test-bt.shuffle.R tests/testthat/test-bt.slop.R tests/testthat/test-bt.sort.R tests/testthat/test-bt.spacing.R tests/testthat/test-bt.subtract.R tests/testthat/test-bt.unionbedg.R tests/testthat/test-bt.window.R
PhanstielLab/bedtoolsr documentation built on Aug. 29, 2024, 5:37 p.m.