RSEMSummarizeMapping: Summarize the number of mapped, unmapped and ambiguous reads...
In RGLab/RNASeqPipelineR: Construct Standardized pipelines for processing RNASeq data
Description
Usage
Arguments
Value
View source: R/RNASeqPipelineR.R
Description
Summarize the number of mapped, unmapped and ambiguous reads from RSEM output
Usage
1
Arguments
dir
Directory containing RSEM cnt files. If missing, use the RSEM directory from project.
log
return log of reads?
plot
print a ggplot summary
Value
returns a data table of # reads per library, invisibly
RGLab/RNASeqPipelineR documentation built on Jan. 19, 2020, 12:31 a.m.
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Description Usage Arguments Value
View source: R/RNASeqPipelineR.R
Description
Summarize the number of mapped, unmapped and ambiguous reads from RSEM output
Usage
1 |
Arguments
dir |
Directory containing RSEM cnt files. If missing, use the RSEM directory from project. |
log |
return log of reads? |
plot |
print a ggplot summary |
Value
returns a data table of # reads per library, invisibly
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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