concatenateFastq: Concatenate FastQ files

In RGLab/RNASeqPipelineR: Construct Standardized pipelines for processing RNASeq data

Description

Combine several fastq.gz files into one fastq.gz file for each library Decompress the fastq.gz Copy the fastQ files into FASTQ folder

Usage

concatenateFastq(infile, outfile, pattern)

Arguments

infile	character specify the path to the individual fastq.gz directory.
outfile	character specify the path to the FASTQ directory
pattern	character the string want to remove in the fastq.gz files name

RGLab/RNASeqPipelineR documentation built on Jan. 19, 2020, 12:31 a.m.