find_consensus_snps_no_polyfun: Find Consensus SNPs: without PolyFun
In RajLabMSSM/echodata: echoverse module: Fine-mapping data access and formatting
View source: R/find_consensus_snps_no_polyfun.R
find_consensus_snps_no_polyfun R Documentation
Find Consensus SNPs: without PolyFun
Description
Find Consensus SNPs in finemap_loci output, without
using any results from the functional fine-mapping tool PolyFun
(in a new column "Consensus_SNP_noPF").
This helps to avoid any circularity when validating results with functional
annotation that PolyFun may have been trained on.
Usage
find_consensus_snps_no_polyfun(dat, verbose = TRUE)
Arguments
dat
Fine-mapping results data.
verbose
Print messages.
Examples
BST1 <- echodata::find_consensus_snps_no_polyfun(dat = echodata::BST1)
RajLabMSSM/echodata documentation built on Nov. 21, 2023, 8 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/find_consensus_snps_no_polyfun.R
| find_consensus_snps_no_polyfun | R Documentation |
Find Consensus SNPs: without PolyFun
Description
Find Consensus SNPs in finemap_loci output, without using any results from the functional fine-mapping tool PolyFun (in a new column "Consensus_SNP_noPF"). This helps to avoid any circularity when validating results with functional annotation that PolyFun may have been trained on.
Usage
find_consensus_snps_no_polyfun(dat, verbose = TRUE)
Arguments
dat |
Fine-mapping results data. |
verbose |
Print messages. |
Examples
BST1 <- echodata::find_consensus_snps_no_polyfun(dat = echodata::BST1)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.