get_SNPgroup_counts: Get SNP group counts
In RajLabMSSM/echodata: echoverse module: Fine-mapping data access and formatting
View source: R/get_SNPgroup_counts.R
get_SNPgroup_counts R Documentation
Get SNP group counts
Description
Tally locus-specific SNP group sizes.
Usage
get_SNPgroup_counts(merged_DT, grouping_vars = "Locus", verbose = TRUE)
Arguments
merged_DT
Merged fine-mapping results generated by
echolocatoR::finemap_loci.
grouping_vars
Column names in merged_DT to group counts by.
verbose
Print messages.
Value
Named list of report tables.
See Also
Other summarise:
get_CS_bins(),
get_CS_counts(),
results_report()
Examples
merged_DT <- echodata::get_Nalls2019_merged()
snp_groups <- get_SNPgroup_counts(merged_DT = merged_DT)
RajLabMSSM/echodata documentation built on Nov. 21, 2023, 8 a.m.
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View source: R/get_SNPgroup_counts.R
| get_SNPgroup_counts | R Documentation |
Get SNP group counts
Description
Tally locus-specific SNP group sizes.
Usage
get_SNPgroup_counts(merged_DT, grouping_vars = "Locus", verbose = TRUE)
Arguments
merged_DT |
Merged fine-mapping results generated by
|
grouping_vars |
Column names in |
verbose |
Print messages. |
Value
Named list of report tables.
See Also
Other summarise:
get_CS_bins(),
get_CS_counts(),
results_report()
Examples
merged_DT <- echodata::get_Nalls2019_merged()
snp_groups <- get_SNPgroup_counts(merged_DT = merged_DT)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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