get_CS_counts: Get Credible Set SNP counts
In RajLabMSSM/echodata: echoverse module: Fine-mapping data access and formatting
View source: R/get_CS_counts.R
get_CS_counts R Documentation
Get Credible Set SNP counts
Description
Tally tool-specific and Union Credible Set sizes
across fine-mapping methods and across loci.
Usage
get_CS_counts(merged_DT, top_CS_only = FALSE)
Arguments
merged_DT
Merged data.table of fine-mapped summary statistics.
top_CS_only
If a given method contains multiple Credible Sets,
only choose one.
See Also
Other summarise:
get_CS_bins(),
get_SNPgroup_counts(),
results_report()
Examples
merged_DT <- echodata::get_Nalls2019_merged()
locus_order <- get_CS_counts(merged_DT = merged_DT)
RajLabMSSM/echodata documentation built on Nov. 21, 2023, 8 a.m.
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View source: R/get_CS_counts.R
| get_CS_counts | R Documentation |
Get Credible Set SNP counts
Description
Tally tool-specific and Union Credible Set sizes across fine-mapping methods and across loci.
Usage
get_CS_counts(merged_DT, top_CS_only = FALSE)
Arguments
merged_DT |
Merged data.table of fine-mapped summary statistics. |
top_CS_only |
If a given method contains multiple Credible Sets, only choose one. |
See Also
Other summarise:
get_CS_bins(),
get_SNPgroup_counts(),
results_report()
Examples
merged_DT <- echodata::get_Nalls2019_merged()
locus_order <- get_CS_counts(merged_DT = merged_DT)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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