gene_trimmer: Remove all SNPs outside of of a given gene.
In RajLabMSSM/echodata: echoverse module: Fine-mapping data access and formatting
gene_trimmer R Documentation
Remove all SNPs outside of of a given gene.
Description
Get the min/max coordinates of a given gene
(including known regulatory regions, introns, and exons).
Remove any SNPs from the data.frame that fall outside these coordinates.
Usage
gene_trimmer(dat, gene, min_POS = NA, max_POS = NA)
See Also
Other SNP filters:
filter_snps(),
limit_snps()
RajLabMSSM/echodata documentation built on Nov. 21, 2023, 8 a.m.
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| gene_trimmer | R Documentation |
Remove all SNPs outside of of a given gene.
Description
Get the min/max coordinates of a given gene (including known regulatory regions, introns, and exons). Remove any SNPs from the data.frame that fall outside these coordinates.
Usage
gene_trimmer(dat, gene, min_POS = NA, max_POS = NA)
See Also
Other SNP filters:
filter_snps(),
limit_snps()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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